added text editors and shells

config.org

@@ -6,9 +6,11 @@
 - [[#literate-file-headers][Literate File Headers]]
   - [[#updatesh][update.sh]]
   - [[#packagestxt][packages.txt]]
-  - [[#pathsh][path.sh]]
   - [[#aliassh][alias.sh]]
+  - [[#pathsh][path.sh]]
   - [[#doom-emacs][Doom Emacs]]
+  - [[#zshrc][.zshrc]]
+  - [[#bashrc][.bashrc]]
 - [[#package-management][Package Management]]
   - [[#arch-and-aur-packages][Arch and AUR Packages]]
 - [[#base-system][Base System]]
@@ -18,25 +20,24 @@
 - [[#desktop-environments-and-window-manager][Desktop Environments and Window Manager]]
   - [[#lightdm][LightDM]]
   - [[#gnome][GNOME]]
-- [[#doom-emacs-1][Doom Emacs]]
+- [[#text-editors][Text Editors]]
-  - [[#installation][Installation]]
+  - [[#doom-emacs-1][Doom Emacs]]
-  - [[#doom-modules][Doom Modules]]
+  - [[#vscode][VSCode]]
-  - [[#general-configuration][General Configuration]]
+  - [[#neovim][Neovim]]
-  - [[#multilanguage-spellcheck][Multilanguage Spellcheck]]
-  - [[#latex][LaTeX]]
-  - [[#org-mode][Org Mode]]
-  - [[#python][Python]]
 - [[#shells][Shells]]
   - [[#aliases][Aliases]]
+  - [[#zsh][ZSH]]
+  - [[#bash][Bash]]
 - [[#themeing][Themeing]]
   - [[#doom-emacs-2][Doom Emacs]]
+- [[#misc-programs][Misc Programs]]
+  - [[#zathura][Zathura]]
 
 * Prerequisites
 - Completed Arch Linux Installation
   - partitioning
   - encryption
   - main user
-
 * Literate File Headers
 ** update.sh
 #+begin_src shell :tangle update.sh
@@ -58,9 +59,8 @@ contains all Arch and AUR packages
 
 #+end_src
 
-** path.sh
+** alias.sh
-contains all modifications to the path variables
+#+begin_src shell :tangle alias.sh
-#+begin_src shell :tangle path.sh
 #!/bin/sh
 # DO NOT EDIT THIS FILE DIRECTLY
 # This is a file generated from a literate programing source file
@@ -69,8 +69,9 @@ contains all modifications to the path variables
 
 #+end_src
 
-** alias.sh
+** path.sh
-#+begin_src shell :tangle alias.sh
+contains all modifications to the path variables
+#+begin_src shell :tangle path.sh
 #!/bin/sh
 # DO NOT EDIT THIS FILE DIRECTLY
 # This is a file generated from a literate programing source file
@@ -229,6 +230,22 @@ We start by simply defining the standard headers used by the three files. These
 #+end_src
 #+html: </details>
 
+** .zshrc
+#+begin_src shell :tangle ~/.zshrc
+# DO NOT EDIT THIS FILE DIRECTLY
+# This is a file generated from a literate programing source file
+# You should make any changes there and regenerate it from Emacs org-mode
+# using org-babel-tangle (C-c C-v t)
+
+#+end_src
+** .bashrc
+#+begin_src shell :tangle ~/.bashrc
+# DO NOT EDIT THIS FILE DIRECTLY
+# This is a file generated from a literate programing source file
+# You should make any changes there and regenerate it from Emacs org-mode
+# using org-babel-tangle (C-c C-v t)
+
+#+end_src
 * Package Management
 ** Arch and AUR Packages
 *** Yay
@@ -337,10 +354,10 @@ fi
 #+begin_src shell :tangle pkg-list.txt
 gnome
 #+end_src
-
+* Text Editors
-* Doom Emacs
+** Doom Emacs
-** Installation
+*** Installation
-*** [[https://github.com/doomemacs/doomemacs#prerequisites][Prerequisites]]
+**** [[https://github.com/doomemacs/doomemacs#prerequisites][Prerequisites]]
 #+begin_src shell :tangle pkg-list.txt
 git
 emacs
@@ -348,7 +365,7 @@ ripgrep
 findutils
 fd
 #+end_src
-*** Doom Installation
+**** Doom Installation
 ~update.sh~ will install Doom Emacs if needed
 #+begin_src shell :tangle update.sh
 command_name="doom"
@@ -359,11 +376,11 @@ if ! command -v "$command_name" &> /dev/null; then
     ~/.config/emacs/bin/doom install-devel
 fi
 #+end_src
-*** add to PATH
+**** add to PATH
 #+begin_src shell :tangle path.sh
 export PATH=$PATH:~/.config/emacs/bin
 #+end_src
-** Doom Modules
+*** Doom Modules
 #+begin_src emacs-lisp :tangle ~/.config/doom/init.el
 (doom! :input
        ;;bidi              ; (tfel ot) thgir etirw uoy gnipleh
@@ -546,39 +563,39 @@ export PATH=$PATH:~/.config/emacs/bin
        (default +bindings +smartparens))
 #+end_src
 
-** General Configuration
+*** General Configuration
-*** TODO User Information
+**** TODO User Information
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq user-full-name "Paul Lödige"
       user-mail-address "paul@gve-loedige.de")
 #+end_src
 
-*** Visual Settings
+**** Visual Settings
-**** Font
+***** Font
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq doom-font (font-spec :family "Ubuntu Mono" :size 16)
       doom-variable-pitch-font (font-spec :family "Ubuntu" :size 14))
 #+end_src
 
-**** Line Numbering
+***** Line Numbering
 having used Neovim for quiet some time I got used to relative line numbering for navigation.
 Until I get used to the [[https://github.com/Greduan/emacs-theme-gruvbox][evil-snipe]] navigation I would like to keep them.
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq display-line-numbers-type 'relative)
 #+end_src
 
-*** TODO Authentication
+**** TODO Authentication
 Authentication information will be stored in a encrypted file that is part of my dotfiles
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq auth-sources
     '((:source "~/.authinfo.gpg")))
 #+end_src
-*** Misc
+**** Misc
-**** Set Start of Week to Monday
+***** Set Start of Week to Monday
 #+begin_src emacs-lisp :tangle ~/.config/doom/init.el
 (setq calendar-week-start-day 1)
 #+end_src
-** Multilanguage Spellcheck
+*** Multilanguage Spellcheck
 Enables use of multiple dictionaries. In my case German and English
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (with-eval-after-load "ispell"
@@ -588,16 +605,12 @@ Enables use of multiple dictionaries. In my case German and English
   (ispell-hunspell-add-multi-dic "en_US,de_DE"))
 #+end_src
 
-** TODO LaTeX
+*** TODO LaTeX
-*** Set PDF Viewer
+**** Set PDF Viewer
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq +latex-viewers '(zathura))
 #+end_src
-requires zathura to be installed
+**** Add auto-compile hook for TeX mode
-#+begin_src shell :tangle pkg-list.txt
-zathura
-#+end_src
-*** Add auto-compile hook for TeX mode
 Because TeX-command-run-all is an interactive command we need a helper function for the hook.
 This function could also become useful if we ever want to extend the compile command
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
@@ -610,43 +623,43 @@ This function could also become useful if we ever want to extend the compile com
             (add-hook 'after-save-hook #'custom-tex-compile nil t)))
 #+end_src
 
-** Org Mode
+*** Org Mode
-*** Default Location
+**** Default Location
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq org-directory "~/org/")
 #+end_src
-*** Visual
+**** Visual
-**** Enable Header Numbering
+***** Enable Header Numbering
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org
   (setq org-startup-numerated t))
 #+end_src
-**** Image Display as Default
+***** Image Display as Default
 [[https://emacs.stackexchange.com/questions/57603/how-to-always-display-inline-images-by-default-existing-solutions-dont-seem-to#comment89772_57607][this stackexchange comment]] states that this has to be done before the [[Add "~/org" to Agenda][adding the ~/org directory to Org Agenda]]
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org
   (setq org-startup-with-inline-images t))
 #+end_src
-**** Enable \LaTeX preview on default
+***** Enable \LaTeX preview on default
 #+begin_src emacs-lisp :tangle ~/.config/doom/init.el
 (after! org
   (setq org-startup-latex-with-latex-preview t))
 #+end_src
 
-*** CalDAV Sync
+**** CalDAV Sync
 [[https://github.com/dengste/org-caldav][org-caldav]] provides a tool for syncing with a CalDAV server (in my case Nextcloud).
 A lot of the config is also taken from [[https://www.reddit.com/r/orgmode/comments/8rl8ep/comment/e0sb5j0/?utm_source=share&utm_medium=web3x&utm_name=web3xcss&utm_term=1&utm_content=share_button][this]] reddit post.
-**** org-caldav installation
+***** org-caldav installation
 #+begin_src emacs-lisp :tangle ~/.config/doom/packages.el
 (package! org-caldav)
 #+end_src
-**** Enable TODOs
+***** Enable TODOs
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org-caldav
   (setq org-icalendar-include-todo 'all
     org-caldav-sync-todo t))
 #+end_src
-**** Configure Sync
+***** Configure Sync
 add the calendars to the org-caldav config
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org-caldav
@@ -655,8 +668,8 @@ add the calendars to the org-caldav config
   (setq org-caldav-calendars
         '((:calendar-id "todo" :files ("~/org/todo.org")))))
 #+end_src
-*** Org Agenda Setup
+**** Org Agenda Setup
-**** Progress States
+***** Progress States
 To get a more nuanced overview of my current TODOs I add more progress states.
 |            | INACTIVE | TODO | BLOCKED | IN_PROGRESS | REVIEW | TESTING |   | DONE | DELEGATED | CANCELED |   |
 |------------+----------+------+---------+-------------+--------+---------+---+------+-----------+----------+---|
@@ -672,7 +685,7 @@ Also set the percent states for [[*CalDAV Sync][CalDAV Sync]]
 (after! org-caldav
   (setq org-caldav-todo-percent-states '((0 "INACTIVE") (1 "TODO") (2 "IN_PROGRESS") (3 "BLOCKED") (90 "REVIEW") (90 "TESTING") (100 "DONE") (100 "DELEGATED") (100 "CANCELED"))))
 #+end_src
-**** Add "~/org" to Agenda
+***** Add "~/org" to Agenda
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org
   (setq org-agenda-files (f-files "~/org"
@@ -680,15 +693,15 @@ Also set the percent states for [[*CalDAV Sync][CalDAV Sync]]
                                     (string= (f-ext f) "org"))
                                   'recursive)))
 #+end_src
-*** Org Roam
+**** Org Roam
-**** set base directory
+***** set base directory
 Both the org files themselves and the database should be located in the same directory to enable syncing via Nextcloud
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org
   (setq org-roam-directory (file-truename "~/org/org-roam"))
   (org-roam-db-autosync-mode))
 #+end_src
-**** Note Templates
+***** Note Templates
 This contains all the capture templates I am using.
 Adding the "#+category: " tag improves the Org Agenda View for tasks captured in Org Roam
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
@@ -704,20 +717,20 @@ Adding the "#+category: " tag improves the Org Agenda View for tasks captured in
       :if-new (file+head "%<%Y%m%d%H%M%S>-${slug}.org" "#+title: Master Thesis Meeting ${title}\n#+category: Master Thesis\n")
       :unnarrowed t))))
 #+end_src
-**** Misc
+***** Misc
-***** Follow Links on RET
+****** Follow Links on RET
 Because the normal shortcut for `org-open-at-point` is quite cumbersome I want it to just follow links when clicking the RET button
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org
   (setq return-follows-link t))
 #+end_src
-*** Org Transclusion
+**** Org Transclusion
-**** Installation
+***** Installation
 #+begin_src emacs-lisp :tangle ~/.config/doom/packages.el
 (package! org-transclusion)
 #+end_src
-*** Bibliography
+**** Bibliography
-**** TODO Enabling Zotero Links
+***** TODO Enabling Zotero Links
 Following [[https://www.riccardopinosio.com/blog/posts/zotero_notes_article.html#opening-zotero-pdf-from-org-roam][this guide]] we enable using zotero links with the following code
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! org
@@ -727,15 +740,15 @@ Following [[https://www.riccardopinosio.com/blog/posts/zotero_notes_article.html
                              (browse-url
                               (format "zotero:%s" zpath)))))
 #+end_src
-**** Citar Config
+***** Citar Config
-***** Setting the Citar Bibliography
+****** Setting the Citar Bibliography
 Following the [[https://github.com/doomemacs/doomemacs/tree/master/modules/tools/biblio][Doom Emacs documentation ]]we set the citar bibliography and notes paths
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! oc
   (setq citar-bibliography '("~/org/biblio.bib"))
   (setq citar-notes-paths '("~/org/org-roam/")))
 #+end_src
-***** Citar Templates
+****** Citar Templates
 Following the [[https://github.com/emacs-citar/citar#configuration][citar package documentation]] we modify the note template to contain the pdf link to Zotero
 *NOTE:* This requires the a [[https://www.riccardopinosio.com/blog/posts/zotero_notes_article.html#opening-zotero-pdf-from-org-roam][specific Zotero Export Configuration]]
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
@@ -746,7 +759,7 @@ Following the [[https://github.com/emacs-citar/citar#configuration][citar packag
         (preview . "${author editor:%etal} (${year issued date}) ${title}, ${journal journaltitle publisher container-title collection-title}.\n")
         (note . "Notes on ${author editor:%etal}, ${title}\npdf: ${file}"))))
 #+end_src
-***** Enable Zotero Link Support
+****** Enable Zotero Link Support
 In [[https://www.riccardopinosio.com/blog/posts/zotero_notes_article.html#citar][this tutorial]] I found the config for enabling Zotero Link Support through Citar
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! citar
@@ -760,15 +773,28 @@ In [[https://www.riccardopinosio.com/blog/posts/zotero_notes_article.html#citar]
   (add-to-list 'citar-file-open-functions '("pdf" . citar-file-open-external)))
 #+end_src
 
-** Python
+*** Python
-*** TODO Set Debugger to debugpy
+**** TODO Set Debugger to debugpy
 as per the [[https://github.com/doomemacs/doomemacs/tree/master/modules/tools/debugger#dap-python][Doom Emacs Documentation]] it is recommended to set the debugger used for python debugging to debugpy
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (after! dap-mode
   (setq dap-python-debugger 'debugpy))
 #+end_src
 
+** VSCode
+*** Installation
+#+begin_src shell :tangle pkg-list.txt
+visual-studio-code-bin
+#+end_src
+*** TODO Add-Ons
+** [[https://neovim.io/][Neovim]]
+*** Installation
+#+begin_src shell :tangle pkg-list.txt
+neovim
+#+end_src
+*** TODO Configuration
 * Shells
+ZSH is used as the default shell
 ** Aliases
 *** Shutdown and Reboot
 #+begin_src shell :tangle alias.sh
@@ -782,6 +808,152 @@ alias mv='mv -i'
 alias rm='rm -i'
 #+end_src
 
+*** Git Aliases
+#+begin_src shell :tangle pkg-list.txt
+git
+#+end_src
+#+begin_src shell :tangle alias.sh
+alias add='git add'
+alias addup='git add -u'
+alias addall='git add .'
+alias branch='git branch'
+alias checkout='git checkout'
+alias co='git checkout'
+alias clone='git clone'
+alias commit='git commit -m'
+alias fetch='git fetch'
+alias pull='git pull origin'
+alias push='git push origin'
+alias status='git status'
+alias diff='git diff'
+alias remote='git remote'
+alias ftemplate='git fetch template'
+alias mtemplate='git merge template/master --allow-unrelated-histories'
+alias log='git log'
+#+end_src
+** [[https://www.zsh.org/][ZSH]]
+*** Installation
+#+begin_src shell :tangle pkg-list.txt
+zsh
+which
+#+end_src
+*** Set as default shell
+#+begin_src shell :tangle update.sh
+chsh-s $(which zsh)
+#+end_src
+*** [[https://ohmyz.sh/][Oh-My-Zsh]]
+**** Installation
+#+begin_src shell :tangle pkg-list.txt
+curl
+#+end_src
+install if needed
+#+begin_src shell :tangle update.sh
+if [ ! -d "~/.oh-my-zsh" ]; then
+   echo "Installing Oh-My-Zsh..."
+   sh -c "$(curl -fsSL https://raw.githubusercontent.com/ohmyzsh/ohmyzsh/master/tools/install.sh)"
+fi
+#+end_src
+**** Basic Configuration
+#+begin_src shell ~/.zshrc
+export ZSH="~/.oh-my-zsh"
+
+# Uncomment the following line to use case-sensitive completion.
+CASE_SENSITIVE="false"
+
+# Uncomment the following line to use hyphen-insensitive completion.
+# Case-sensitive completion must be off. _ and - will be interchangeable.
+HYPHEN_INSENSITIVE="true"
+
+# Uncomment the following line to change how often to auto-update (in days).
+export UPDATE_ZSH_DAYS=3
+
+# Uncomment the following line to enable command auto-correction.
+ENABLE_CORRECTION="true"
+
+# Uncomment the following line to display red dots whilst waiting for completion.
+# Caution: this setting can cause issues with multiline prompts (zsh 5.7.1 and newer seem to work)
+# See https://github.com/ohmyzsh/ohmyzsh/issues/5765
+COMPLETION_WAITING_DOTS="true"
+#+end_src
+**** TODO [[https://github.com/ohmyzsh/ohmyzsh/wiki/Plugins][Plugins]]
+#+begin_src shell ~/.zshrc
+# Which plugins would you like to load?
+# Standard plugins can be found in $ZSH/plugins/
+# Custom plugins may be added to $ZSH_CUSTOM/plugins/
+# Example format: plugins=(rails git textmate ruby lighthouse)
+# Add wisely, as too many plugins slow down shell startup.
+plugins=(
+    git
+    svn
+    themes
+    command-not-found
+    vi-mode
+    extract
+    # # non oh-my-zsh plugins
+    # zsh-autosuggestions
+    # zsh-syntax-highlighting
+    # conda-zsh-completion
+)
+#+end_src
+*** [[https://github.com/romkatv/powerlevel10k][Powerlevel10k]]
+install if needed
+#+begin_src shell :tangle pkg-list.txt
+git
+#+end_src
+#+begin_src shell :tangle update.sh
+if [ ! -d "~/.oh-my-zsh/custom/themes/powerlevel10k" ]; then
+   echo "Installing Powerlevel10k..."
+   git clone --depth=1 https://github.com/romkatv/powerlevel10k.git ~/.oh-my-zsh/custom/themes/powerlevel10k
+fi
+#+end_src
+set as zsh theme
+#+begin_src shell .zshrc
+ZSH_THEME="powerlevel10k/powerlevel10k"
+#+end_src
+
+*** Configuration
+**** Source Aliases
+#+begin_src shell ~/.zshrc
+source alias.sh
+#+end_src
+**** Modify PATH
+#+begin_src shell ~/.zshrc
+source path.sh
+#+end_src
+**** [[https://github.com/dylanaraps/neofetch][neofetch]]
+install
+#+begin_src shell :tangle pkg-list.txt
+neofetch
+#+end_src
+and start
+#+begin_src shell ~/.zshrc
+neofetch
+#+end_src
+** [[https://www.gnu.org/software/bash/][Bash]]
+*** Installation
+#+begin_src shell :tangle pkg-list.txt
+bash
+#+end_src
+*** Configuration
+**** Source Aliases
+#+begin_src shell ~/.bashrc
+source alias.sh
+#+end_src
+**** Modify PATH
+#+begin_src shell ~/.bashrc
+source path.sh
+#+end_src
+**** [[https://github.com/dylanaraps/neofetch][neofetch]]
+install
+#+begin_src shell :tangle pkg-list.txt
+neofetch
+#+end_src
+and start
+#+begin_src shell ~/.bashrc
+neofetch
+#+end_src
+
+
 * Themeing
 ** Doom Emacs
 I like the [[https://github.com/Greduan/emacs-theme-gruvbox][Gruvbox Theme by Eduardo Lavaque]].
@@ -793,3 +965,14 @@ and then set it
 #+begin_src emacs-lisp :tangle ~/.config/doom/config.el
 (setq doom-theme 'gruvbox-dark-hard)
 #+end_src
+
+* Misc Programs
+** Zathura
+*** Installation
+#+begin_src shell :tangle pkg-list.txt
+zathura
+#+end_src
+*** enable synctex
+#+begin_src shell :tangle ~/.config/zathura/zathurarc
+set synctex true
+#+end_src